C646

Modify Date: 2024-01-05 17:40:48

C646 Structure
C646 structure
Common Name C646
CAS Number 328968-36-1 Molecular Weight 445.424
Density 1.4±0.1 g/cm3 Boiling Point 662.6±65.0 °C at 760 mmHg
Molecular Formula C24H19N3O6 Melting Point 224-226℃
MSDS Chinese USA Flash Point 354.5±34.3 °C
Symbol GHS09
GHS09
Signal Word Warning

 Use of C646


C646 is a selective and competitive histone acetyltransferase p300 inhibitor with Ki of 400 nM, and is less potent for other acetyltransferases.

 Names

Name 4-[(4Z)-4-[[5-(4,5-dimethyl-2-nitrophenyl)furan-2-yl]methylidene]-3-methyl-5-oxopyrazol-1-yl]benzoic acid
Synonym More Synonyms

 C646 Biological Activity

Description C646 is a selective and competitive histone acetyltransferase p300 inhibitor with Ki of 400 nM, and is less potent for other acetyltransferases.
Related Catalog
Target

Ki: 400 nM (histone acetyltransferase p300)

In Vitro C646 is a linear competitive inhibitor of p300 versus acetyl-CoA with a Ki of 400 nM. C646 shows a noncompetitive pattern of p300 inhibition versus H4-15 peptide substrate. C646 treatment reduces histone H3 and H4 acetylation levels and abrogates TSA-induced acetylation in cells. C646 has a more potent effect on cell growth than Lys-CoA-Tat does[1]. C646 enhances mitotic catastrophe after IR and suppresses phosphorylation of CHK1 after IRin A549 cells[2]. C646 attenuates the increased acetylation of GATA1 and the increased transcriptional activity of GATA1 induced by EDAG[3].
Kinase Assay Reactions are carried out at 30°C for times varying from 2 to 4 min under the following reaction conditions: 50 mM HEPES, pH 7.9, 50 mM NaCl, 0.05 mg/mL BSA, 5 mM DTT, 0.05 mM EDTA, 0.25% DMSO, 10 μM of X. laevis histone H3, and varying concentrations of C646 (0, 3, 10 μM). The reactions contains either 70 nanograms of Rtt109/Vps75, 15 nanograms of yGcn5, 300 nanograms of the SAS complex or 1 microgram of hMOZ. The amount of enzyme used in each assay is estimated by comparing Coomassie Blue staining of samples with bovine serum albumin standards, analyzed by SDS-PAGE. The mixture is allowed to equilibrate at 30°C for 10 min before the reaction is initialed with addition of a 1:1 mixture of 12C-AcCoA and 14C-AcCoA to a final concentration of 20 μM. After the appropriate time the reaction is quenched with 6 X Tris-Tricine gel loading buffer which contains 0.2mol/LTris-Cl pH 6.8, 40% v/v glycerol, 14% w/v SDS, 0.3 mol/LDTT, and 0.06% w/v Coomassie Blue. The 14C-labeled histone substrates are separated from reactants on a 16.5% Tris-Tricine SDS-PAGE gel. The rate of 14C-incorporation into histone H3 is quantified by autoradiography. All assays are in duplicate, and these generally agree within 20%.
Cell Assay Cells are seeded in 6-well plates, incubated at 37°C for 4-10 h for attachment, and exposed (or not) to C646. After incubation for 2 h, the cells are subjected (or not) to IR and incubated for 10 days for colony formation. The cells are fixed with methanol and stained with crystal violet. Colonies of at least 50 cells are counted. The surviving fraction is normalized to the corresponding controls. The dose required to reduce the surviving fraction to 10% (D10) of the irradiated cells is calculated by using the linear-quadratic model.
References

[1]. Bowers EM, et al. Virtual ligand screening of the p300/CBP histone acetyltransferase: identification of a selective small molecule inhibitor. Chem Biol. 2010 May 28;17(5):471-82.

[2]. Oike T, et al. C646, a selective small molecule inhibitor of histone acetyltransferase p300, radiosensitizes lung cancer cells by enhancing mitotic catastrophe. Radiother Oncol. 2014 May;111(2):222-7.

[3]. Zheng WW, et al. EDAG positively regulates erythroid differentiation and modifies GATA1 acetylation through recruiting p300. Stem Cells. 2014 Aug;32(8):2278-89.

 Chemical & Physical Properties

Density 1.4±0.1 g/cm3
Boiling Point 662.6±65.0 °C at 760 mmHg
Melting Point 224-226℃
Molecular Formula C24H19N3O6
Molecular Weight 445.424
Flash Point 354.5±34.3 °C
Exact Mass 445.127380
PSA 128.93000
LogP 4.87
Appearance of Characters red to brown
Vapour Pressure 0.0±2.1 mmHg at 25°C
Index of Refraction 1.663
Storage condition 2-8°C
Water Solubility DMSO: >25mg/mL

 Safety Information

Symbol GHS09
GHS09
Signal Word Warning
Hazard Statements H410
Precautionary Statements P273-P501
Hazard Codes N
Risk Phrases 50
Safety Phrases 61
RIDADR UN 3077 9 / PGIII

 Articles17

More Articles
Sp3/REST/HDAC1/HDAC2 Complex Represses and Sp1/HIF-1/p300 Complex Activates ncx1 Gene Transcription, in Brain Ischemia and in Ischemic Brain Preconditioning, by Epigenetic Mechanism.

J. Neurosci. 35 , 7332-48, (2015)

The Na(+)-Ca(2+) exchanger 1 (NCX1) is reduced in stroke by the RE1-silencing transcription factor (REST), whereas it is increased in ischemic brain preconditioning (PC) by hypoxia-inducible factor 1 ...

P300-dependent STAT3 acetylation is necessary for angiotensin II-induced pro-fibrotic responses in renal tubular epithelial cells.

Acta Pharmacol. Sin. 35(9) , 1157-66, (2014)

To explore the signal transducer and activator of transcription 3 (STAT3) signaling pathway, especially STAT3 acetylation, in angiotensin II (Ang II)-induced pro-fibrotic responses in renal tubular ep...

Acetylation of glucokinase regulatory protein decreases glucose metabolism by suppressing glucokinase activity.

Sci. Rep. 5 , 17395, (2015)

Glucokinase (GK), mainly expressed in the liver and pancreatic β-cells, is critical for maintaining glucose homeostasis. GK expression and kinase activity, respectively, are both modulated at the tran...

 Synonyms

Benzoic acid, 4-[(4Z)-4-[[5-(4,5-dimethyl-2-nitrophenyl)-2-furanyl]methylene]-4,5-dihydro-3-methyl-5-oxo-1H-pyrazol-1-yl]-
4-[(4Z)-4-{[5-(4,5-Dimethyl-2-nitrophenyl)-2-furyl]methylene}-3-methyl-5-oxo-4,5-dihydro-1H-pyrazol-1-yl]benzoic acid
c646
qcr-235
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